Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
446223 | 2klb RC | 16388 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_2klb
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 20
_NOE_completeness_stats.Residue_count 154
_NOE_completeness_stats.Total_atom_count 2311
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 799
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 63.7
_NOE_completeness_stats.Constraint_unexpanded_count 1887
_NOE_completeness_stats.Constraint_count 1887
_NOE_completeness_stats.Constraint_exp_unfiltered_count 1591
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 0
_NOE_completeness_stats.Constraint_intraresidue_count 156
_NOE_completeness_stats.Constraint_surplus_count 61
_NOE_completeness_stats.Constraint_observed_count 1670
_NOE_completeness_stats.Constraint_expected_count 1541
_NOE_completeness_stats.Constraint_matched_count 981
_NOE_completeness_stats.Constraint_unmatched_count 689
_NOE_completeness_stats.Constraint_exp_nonobs_count 560
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 682 654 498 76.1 1.0 >sigma
medium-range 459 407 233 57.2 -0.3 .
long-range 529 480 250 52.1 -0.7 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 5 5 0 0 0 0 0 0 0 0 . 5 100.0 100.0
shell 2.00 2.50 96 86 0 0 0 0 0 6 0 24 . 56 89.6 90.1
shell 2.50 3.00 286 250 0 0 0 0 0 9 0 58 . 183 87.4 88.1
shell 3.00 3.50 415 266 0 0 0 0 0 0 0 28 . 238 64.1 75.7
shell 3.50 4.00 739 374 0 0 0 0 0 1 0 20 . 353 50.6 63.7
shell 4.00 4.50 1210 309 0 0 0 0 0 0 0 0 . 309 25.5 46.9
shell 4.50 5.00 1644 207 0 0 0 0 0 0 0 0 . 207 12.6 34.1
shell 5.00 5.50 2175 111 0 0 0 0 0 0 0 1 . 110 5.1 24.5
shell 5.50 6.00 2596 47 0 0 0 0 0 0 0 0 . 47 1.8 18.1
shell 6.00 6.50 2722 11 0 0 0 0 0 0 0 0 . 11 0.4 14.0
shell 6.50 7.00 3046 4 0 0 0 0 0 0 0 0 . 4 0.1 11.2
shell 7.00 7.50 3151 0 0 0 0 0 0 0 0 0 . 0 0.0 9.2
shell 7.50 8.00 3642 0 0 0 0 0 0 0 0 0 . 0 0.0 7.7
shell 8.00 8.50 3953 0 0 0 0 0 0 0 0 0 . 0 0.0 6.5
shell 8.50 9.00 4165 0 0 0 0 0 0 0 0 0 . 0 0.0 5.6
sums . . 29845 1670 0 0 0 0 0 16 0 131 . 1,523 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 SER 4 10 11 5 45.5 -1.0 >sigma
1 2 ILE 6 33 42 22 52.4 -0.7 .
1 3 GLY 3 28 18 14 77.8 0.7 .
1 4 VAL 5 48 46 30 65.2 0.0 .
1 5 PHE 7 72 53 40 75.5 0.5 .
1 6 TYR 6 47 39 25 64.1 -0.1 .
1 7 VAL 5 33 36 17 47.2 -0.9 .
1 8 SER 4 14 14 4 28.6 -1.9 >sigma
1 9 GLU 5 6 15 3 20.0 -2.3 >sigma
1 10 TYR 6 21 22 13 59.1 -0.3 .
1 11 GLY 3 11 6 6 100.0 1.8 >sigma
1 12 TYR 6 35 29 21 72.4 0.4 .
1 13 SER 4 27 21 13 61.9 -0.2 .
1 14 ASP 4 15 20 13 65.0 -0.0 .
1 15 ARG 7 26 22 17 77.3 0.6 .
1 16 LEU 7 46 52 32 61.5 -0.2 .
1 17 ALA 3 25 26 18 69.2 0.2 .
1 18 GLN 7 25 19 17 89.5 1.3 >sigma
1 19 ALA 3 32 25 21 84.0 1.0 .
1 20 ILE 6 36 51 24 47.1 -0.9 .
1 21 ILE 6 28 35 19 54.3 -0.6 .
1 22 ASN 6 23 15 13 86.7 1.1 >sigma
1 23 GLY 3 14 12 9 75.0 0.5 .
1 24 ILE 6 33 44 21 47.7 -0.9 .
1 25 THR 4 23 18 15 83.3 0.9 .
1 26 LYS 7 12 11 8 72.7 0.4 .
1 27 THR 4 14 19 11 57.9 -0.4 .
1 28 GLY 3 6 10 6 60.0 -0.3 .
1 29 VAL 5 30 25 14 56.0 -0.5 .
1 30 GLY 3 11 9 6 66.7 0.1 .
1 31 VAL 5 22 34 12 35.3 -1.6 >sigma
1 32 ASP 4 21 18 15 83.3 0.9 .
1 33 VAL 5 19 22 14 63.6 -0.1 .
1 34 VAL 5 38 33 24 72.7 0.4 .
1 35 ASP 4 17 13 11 84.6 1.0 >sigma
1 36 LEU 7 36 43 22 51.2 -0.7 .
1 37 GLY 3 17 19 12 63.2 -0.1 .
1 38 ALA 3 20 13 12 92.3 1.4 >sigma
1 39 ALA 3 14 8 8 100.0 1.8 >sigma
1 40 VAL 5 29 18 11 61.1 -0.2 .
1 41 ASP 4 14 15 9 60.0 -0.3 .
1 42 LEU 7 17 19 10 52.6 -0.6 .
1 43 GLN 7 12 14 10 71.4 0.3 .
1 44 GLU 5 14 23 10 43.5 -1.1 >sigma
1 45 LEU 7 31 33 18 54.5 -0.5 .
1 46 ARG 7 22 19 16 84.2 1.0 .
1 47 GLU 5 12 17 10 58.8 -0.3 .
1 48 LEU 7 47 37 24 64.9 -0.0 .
1 49 VAL 5 34 20 17 85.0 1.0 >sigma
1 50 GLY 3 11 11 10 90.9 1.3 >sigma
1 51 ARG 7 12 20 8 40.0 -1.3 >sigma
1 52 CYS 4 20 14 9 64.3 -0.0 .
1 53 THR 4 18 10 9 90.0 1.3 >sigma
1 54 GLY 3 25 16 14 87.5 1.2 >sigma
1 55 LEU 7 62 43 27 62.8 -0.1 .
1 56 VAL 5 42 38 25 65.8 0.0 .
1 57 ILE 6 44 42 22 52.4 -0.7 .
1 58 GLY 3 13 16 6 37.5 -1.4 >sigma
1 59 MET 6 11 9 5 55.6 -0.5 .
1 60 SER 4 15 12 7 58.3 -0.4 .
1 61 PRO 5 23 19 13 68.4 0.2 .
1 62 ALA 3 11 12 8 66.7 0.1 .
1 63 ALA 3 12 12 10 83.3 0.9 .
1 64 SER 4 23 19 14 73.7 0.4 .
1 65 ALA 3 16 25 14 56.0 -0.5 .
1 66 ALA 3 17 12 10 83.3 0.9 .
1 67 SER 4 14 12 8 66.7 0.1 .
1 68 ILE 6 34 36 16 44.4 -1.1 >sigma
1 69 GLN 7 24 23 18 78.3 0.7 .
1 70 GLY 3 9 9 7 77.8 0.7 .
1 71 ALA 3 26 18 13 72.2 0.4 .
1 72 LEU 7 27 37 18 48.6 -0.9 .
1 73 SER 4 11 10 7 70.0 0.3 .
1 74 THR 4 23 20 12 60.0 -0.3 .
1 75 ILE 6 55 38 26 68.4 0.2 .
1 76 LEU 7 46 31 26 83.9 1.0 .
1 77 GLY 3 11 8 6 75.0 0.5 .
1 78 SER 4 19 14 9 64.3 -0.0 .
1 79 VAL 5 49 27 19 70.4 0.3 .
1 80 ASN 6 14 9 6 66.7 0.1 .
1 81 GLU 5 10 13 6 46.2 -1.0 .
1 82 LYS 7 15 14 6 42.9 -1.2 >sigma
1 83 GLN 7 23 15 10 66.7 0.1 .
1 84 ALA 3 27 25 19 76.0 0.6 .
1 85 VAL 5 45 39 28 71.8 0.3 .
1 86 GLY 3 15 20 13 65.0 -0.0 .
1 87 ILE 6 19 16 9 56.3 -0.5 .
1 88 PHE 7 24 29 14 48.3 -0.9 .
1 89 GLU 5 7 9 2 22.2 -2.2 >sigma
1 90 THR 4 22 22 8 36.4 -1.5 >sigma
1 91 GLY 3 14 13 9 69.2 0.2 .
1 92 GLY 3 5 6 5 83.3 0.9 .
1 93 GLY 3 6 6 6 100.0 1.8 >sigma
1 94 ASP 4 11 6 6 100.0 1.8 >sigma
1 95 ASP 4 15 9 8 88.9 1.2 >sigma
1 96 GLU 5 8 12 7 58.3 -0.4 .
1 97 PRO 5 15 21 8 38.1 -1.4 >sigma
1 98 ILE 6 31 28 17 60.7 -0.2 .
1 99 ASP 4 19 17 14 82.4 0.9 .
1 100 PRO 5 18 20 16 80.0 0.8 .
1 101 LEU 7 32 28 17 60.7 -0.2 .
1 102 LEU 7 21 26 12 46.2 -1.0 .
1 103 SER 4 18 15 13 86.7 1.1 >sigma
1 104 LYS 7 31 26 22 84.6 1.0 >sigma
1 105 PHE 7 40 34 20 58.8 -0.3 .
1 106 ARG 7 14 15 7 46.7 -1.0 .
1 107 ASN 6 13 13 7 53.8 -0.6 .
1 108 LEU 7 39 28 15 53.6 -0.6 .
1 109 GLY 3 15 10 8 80.0 0.8 .
1 110 LEU 7 49 44 21 47.7 -0.9 .
1 111 THR 4 20 15 12 80.0 0.8 .
1 112 THR 4 17 11 9 81.8 0.9 .
1 113 ALA 3 16 16 11 68.8 0.2 .
1 114 PHE 7 13 12 7 58.3 -0.4 .
1 115 PRO 5 15 10 6 60.0 -0.3 .
1 116 ALA 3 12 7 5 71.4 0.3 .
1 117 ILE 6 17 7 7 100.0 1.8 >sigma
1 118 ARG 7 9 7 6 85.7 1.1 >sigma
1 119 ILE 6 23 20 10 50.0 -0.8 .
1 120 LYS 7 14 10 9 90.0 1.3 >sigma
1 121 GLN 7 15 18 11 61.1 -0.2 .
1 122 THR 4 21 16 10 62.5 -0.1 .
1 123 PRO 5 32 37 20 54.1 -0.6 .
1 124 THR 4 16 11 10 90.9 1.3 >sigma
1 125 GLU 5 14 12 8 66.7 0.1 .
1 126 ASN 6 15 14 9 64.3 -0.0 .
1 127 THR 4 27 33 19 57.6 -0.4 .
1 128 TYR 6 42 30 25 83.3 0.9 .
1 129 LYS 7 17 16 11 68.8 0.2 .
1 130 LEU 7 20 17 13 76.5 0.6 .
1 131 CYS 4 26 24 20 83.3 0.9 .
1 132 GLU 5 16 17 11 64.7 -0.0 .
1 133 GLU 5 14 14 10 71.4 0.3 .
1 134 ALA 3 23 17 16 94.1 1.5 >sigma
1 135 GLY 3 27 17 13 76.5 0.6 .
1 136 THR 4 19 21 13 61.9 -0.2 .
1 137 ASP 4 18 15 14 93.3 1.5 >sigma
1 138 LEU 7 35 26 17 65.4 0.0 .
1 139 GLY 3 33 19 14 73.7 0.4 .
1 140 GLN 7 18 22 12 54.5 -0.5 .
1 141 TRP 10 24 26 18 69.2 0.2 .
1 142 VAL 5 49 36 25 69.4 0.2 .
1 143 THR 4 21 23 14 60.9 -0.2 .
1 144 ARG 7 9 16 8 50.0 -0.8 .
1 145 ASP 4 10 11 9 81.8 0.9 .
1 146 ARG 7 11 14 9 64.3 -0.0 .
1 147 LEU 7 9 10 7 70.0 0.3 .
1 148 GLU 5 12 10 8 80.0 0.8 .
1 149 HIS 6 10 9 6 66.7 0.1 .
1 150 HIS 6 3 7 3 42.9 -1.2 >sigma
1 151 HIS 6 0 7 0 0.0 -3.4 >sigma
1 152 HIS 6 0 7 0 0.0 -3.4 >sigma
1 153 HIS 6 0 7 0 0.0 -3.4 >sigma
1 154 HIS 6 0 4 0 0.0 -3.4 >sigma
stop_
save_