Result table
| image | mrblock_id | pdb_id | bmrb_id | cing | stage | program | type | subtype | subsubtype |
|
|
395554 | 1rw2 RC | 5907 | cing | 4-filtered-FRED | Wattos | check | completeness | distance |
data_1rw2
save_NOE_Completeness
_NOE_completeness_stats.Sf_category NOE_completeness_statistics
_NOE_completeness_stats.Model_count 10
_NOE_completeness_stats.Residue_count 152
_NOE_completeness_stats.Total_atom_count 2433
_NOE_completeness_stats.Observable_atom_definition ob_standard
_NOE_completeness_stats.Observable_atom_count 851
_NOE_completeness_stats.Use_intra_residue_restraints no
_NOE_completeness_stats.Redundancy_threshold_pct 5.0
_NOE_completeness_stats.Distance_averaging_power 1.00
_NOE_completeness_stats.Completeness_cutoff 4.00
_NOE_completeness_stats.Completeness_cumulative_pct 15.2
_NOE_completeness_stats.Constraint_unexpanded_count 909
_NOE_completeness_stats.Constraint_count 909
_NOE_completeness_stats.Constraint_exp_unfiltered_count 2261
_NOE_completeness_stats.Constraint_exceptional_count 0
_NOE_completeness_stats.Constraint_nonobservable_count 110
_NOE_completeness_stats.Constraint_intraresidue_count 42
_NOE_completeness_stats.Constraint_surplus_count 1
_NOE_completeness_stats.Constraint_observed_count 756
_NOE_completeness_stats.Constraint_expected_count 2261
_NOE_completeness_stats.Constraint_matched_count 343
_NOE_completeness_stats.Constraint_unmatched_count 413
_NOE_completeness_stats.Constraint_exp_nonobs_count 1918
_NOE_completeness_stats.Details
;
A detailed methodology description is available at:
http://nmr.cmbi.ru.nl/~jd/wattos/doc/Wattos/Soup/Constraint/dc_completeness.html
Please note that the contributions in ambiguous restraints are considered
separate 'restraints' for the sets defined below.
The cut off for all statistics except those in the by-shell table is
given below by the above tag: _NOE_completeness_stats.Completeness_cutoff
Description of the tags in this list:
* 1 * Administrative tag
* 2 * Administrative tag
* 3 * Administrative tag
* 4 * Number of models
* 5 * Number of residues
* 6 * Number of atoms
* 7 * Standard set name of observable atom definitions
see: Doreleijers et al., J.Biomol.NMR 14, 123-132 (1999).
* 8 * Observable atom(group)s
* 9 * Include intra residue restraints
* 10 * Surplus threshold for determining redundant restraints
* 11 * Power for averaging the distance over models
* 12 * Up to what distance are NOEs expected
* 13 * Cumulative completeness percentage
* 14 * Number of unexpanded restraints in restraint list.
* 15 * Number of restraints in restraint list. Set U
* 16 * Expected restraints based on criteria in list. Set V
Set V differs from set B only if intra residue restraints are analyzed.
* 17 * Exceptional restraints, i.e. with an unknown atom.Set E
* 18 * Not observable NOEs with e.g. hydroxyl Ser HG. Set O
Even though restraints with these atom types might have been observed they are
excluded from the analysis.
* 19 * Intra-residue restraints if not to be analyzed. Set I
* 20 * Surplus like double restraints. Set S
* 21 * Observed restraints. Set A = U - (E u O u I u S)
* 22 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 23 * Observed restraints matched to the expected. Set M = A n B
* 24 * Observed restraints that were not expected. Set C = A - M
* 25 * Expected restraints that were not observed. Set D = B - M
* 26 * This tag
Description of the tags in the class table:
* 1 * Class of restraint. Note that 'medium-range' involves (2<=i<=4) contacts.
Possible values are: intraresidue,sequential,medium-range,long-range, and intermolecular.
* 2 * Observed restraints. Set A = U - (E u O u I u S)
* 3 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 4 * Observed restraints matched to the expected. Set M = A n B
* 5 * Completeness percentage
* 6 * Standard deviation from the average over the classes.
* 7 * Extra information
* 8 * Administrative tag
* 9 * Administrative tag
Description of the tags in the shell table.
The first row shows the lower limit of the shells requested and
The last row shows the total number of restraints over the shells.
* 1 * Description of the content of the row: edges, shell, or sums.
The value determines the meaning of the values to the nine 'Matched_shell_x' tags among others.
* 2 * Lower limit of shell of expected restraints.
* 3 * Upper limit of shell of expected restraints.
* 4 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 5 * Observed restraints matched to the expected. Set M = A n B
* 6 * Matched restraints with experimental distance in shell 1
* 7 * Matched restraints with experimental distance in shell 2
* 8 * Matched restraints with experimental distance in shell 3
* 9 * Matched restraints with experimental distance in shell 4
* 10 * Matched restraints with experimental distance in shell 5
* 11 * Matched restraints with experimental distance in shell 6
* 12 * Matched restraints with experimental distance in shell 7
* 13 * Matched restraints with experimental distance in shell 8
* 14 * Matched restraints with experimental distance in shell 9
* 15 * Matched restraints overflowing the last shell
* 16 * Completeness percentage for this shell
* 17 * Completeness percentage up to upper limit of this shell
* 18 * Administrative tag
* 19 * Administrative tag
Description of the tags in the residue table:
* 1 * Chain identifier
* 2 * Residue number
* 3 * Residue name
* 4 * Observable atom(group)s for this residue.
* 5 * Observed restraints. Set A = U - (E u O u I u S)
* 6 * Expected restraints based on criteria as in A. Set B = V - (I u S)
* 7 * Observed restraints matched to the expected. Set M = A n B
* 8 * Completeness percentage
* 9 * Standard deviation from the average over the residues.
* 10 * Extra information
* 11 * Administrative tag
* 12 * Administrative tag
;
loop_
_NOE_completeness_class.Type
_NOE_completeness_class.Constraint_observed_count
_NOE_completeness_class.Constraint_expected_count
_NOE_completeness_class.Constraint_matched_count
_NOE_completeness_class.Completeness_cumulative_pct
_NOE_completeness_class.Std_dev
_NOE_completeness_class.Details
intraresidue 0 0 0 . . "no intras"
sequential 154 800 37 4.6 -1.0 .
medium-range 307 715 172 24.1 0.8 .
long-range 295 746 134 18.0 0.2 .
intermolecular 0 0 0 . . "no multimer"
stop_
loop_
_NOE_completeness_shell.Type
_NOE_completeness_shell.Shell_start
_NOE_completeness_shell.Shell_end
_NOE_completeness_shell.Constraint_expected_count
_NOE_completeness_shell.Constraint_matched_count
_NOE_completeness_shell.Matched_shell_1
_NOE_completeness_shell.Matched_shell_2
_NOE_completeness_shell.Matched_shell_3
_NOE_completeness_shell.Matched_shell_4
_NOE_completeness_shell.Matched_shell_5
_NOE_completeness_shell.Matched_shell_6
_NOE_completeness_shell.Matched_shell_7
_NOE_completeness_shell.Matched_shell_8
_NOE_completeness_shell.Matched_shell_9
_NOE_completeness_shell.Matched_shell_overflow
_NOE_completeness_shell.Completeness_shell_pct
_NOE_completeness_shell.Completeness_cumulative_pct
edges . . . . 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 . . . .
shell 0.00 2.00 52 20 0 0 0 0 0 0 0 0 . 20 38.5 38.5
shell 2.00 2.50 243 58 0 0 0 0 0 0 3 0 . 55 23.9 26.4
shell 2.50 3.00 412 57 0 0 0 1 0 0 1 1 . 54 13.8 19.1
shell 3.00 3.50 606 103 0 0 0 36 0 0 2 0 . 65 17.0 18.1
shell 3.50 4.00 948 105 0 0 0 15 0 0 0 0 . 90 11.1 15.2
shell 4.00 4.50 1398 111 0 0 0 0 0 0 1 0 . 110 7.9 12.4
shell 4.50 5.00 1952 97 0 0 0 0 0 0 0 0 . 97 5.0 9.8
shell 5.00 5.50 2280 79 0 0 0 0 0 0 1 0 . 78 3.5 8.0
shell 5.50 6.00 2706 64 0 0 0 0 0 0 0 0 . 64 2.4 6.5
shell 6.00 6.50 2947 40 0 0 0 0 0 0 0 0 . 40 1.4 5.4
shell 6.50 7.00 3206 20 0 0 0 0 0 0 0 0 . 20 0.6 4.5
shell 7.00 7.50 3408 0 0 0 0 0 0 0 0 0 . 0 0.0 3.7
shell 7.50 8.00 3775 2 0 0 0 0 0 0 0 0 . 2 0.1 3.2
shell 8.00 8.50 4274 0 0 0 0 0 0 0 0 0 . 0 0.0 2.7
shell 8.50 9.00 4317 0 0 0 0 0 0 0 0 0 . 0 0.0 2.3
sums . . 32524 756 0 0 0 52 0 0 8 1 . 695 . .
stop_
loop_
_NOE_completeness_comp.Entity_assembly_ID
_NOE_completeness_comp.Comp_index_ID
_NOE_completeness_comp.Comp_ID
_NOE_completeness_comp.Obs_atom_count
_NOE_completeness_comp.Constraint_observed_count
_NOE_completeness_comp.Constraint_expected_count
_NOE_completeness_comp.Constraint_matched_count
_NOE_completeness_comp.Completeness_cumulative_pct
_NOE_completeness_comp.Std_dev
_NOE_completeness_comp.Details
1 1 MET 6 0 4 0 0.0 -1.0 >sigma
1 2 HIS 6 0 8 0 0.0 -1.0 >sigma
1 3 HIS 6 0 8 0 0.0 -1.0 >sigma
1 4 HIS 6 0 7 0 0.0 -1.0 >sigma
1 5 HIS 6 0 7 0 0.0 -1.0 >sigma
1 6 HIS 6 0 8 0 0.0 -1.0 >sigma
1 7 HIS 6 0 8 0 0.0 -1.0 >sigma
1 8 LYS 7 0 7 0 0.0 -1.0 >sigma
1 9 LEU 7 0 8 0 0.0 -1.0 >sigma
1 10 LYS 7 0 10 0 0.0 -1.0 >sigma
1 11 THR 4 0 8 0 0.0 -1.0 >sigma
1 12 GLU 5 0 8 0 0.0 -1.0 >sigma
1 13 GLN 7 0 10 0 0.0 -1.0 >sigma
1 14 GLY 3 0 8 0 0.0 -1.0 >sigma
1 15 GLY 3 0 6 0 0.0 -1.0 >sigma
1 16 ALA 3 0 5 0 0.0 -1.0 >sigma
1 17 HIS 6 0 6 0 0.0 -1.0 >sigma
1 18 PHE 7 0 8 0 0.0 -1.0 >sigma
1 19 SER 4 0 7 0 0.0 -1.0 >sigma
1 20 VAL 5 0 7 0 0.0 -1.0 >sigma
1 21 SER 4 0 9 0 0.0 -1.0 >sigma
1 22 SER 4 0 7 0 0.0 -1.0 >sigma
1 23 LEU 7 0 9 0 0.0 -1.0 >sigma
1 24 ALA 3 0 13 0 0.0 -1.0 >sigma
1 25 GLU 5 0 8 0 0.0 -1.0 >sigma
1 26 GLY 3 0 7 0 0.0 -1.0 >sigma
1 27 SER 4 0 8 0 0.0 -1.0 >sigma
1 28 VAL 5 0 16 0 0.0 -1.0 >sigma
1 29 THR 4 0 10 0 0.0 -1.0 >sigma
1 30 SER 4 0 6 0 0.0 -1.0 >sigma
1 31 VAL 5 0 13 0 0.0 -1.0 >sigma
1 32 GLY 3 0 9 0 0.0 -1.0 >sigma
1 33 SER 4 0 8 0 0.0 -1.0 >sigma
1 34 VAL 5 3 12 2 16.7 0.5 .
1 35 ASN 6 14 28 5 17.9 0.6 .
1 36 PRO 5 11 36 2 5.6 -0.5 .
1 37 ALA 3 16 40 10 25.0 1.2 >sigma
1 38 GLU 5 5 32 3 9.4 -0.2 .
1 39 ASN 6 5 19 5 26.3 1.3 >sigma
1 40 PHE 7 24 71 15 21.1 0.9 .
1 41 ARG 7 11 50 6 12.0 0.1 .
1 42 VAL 5 13 44 9 20.5 0.8 .
1 43 LEU 7 34 65 17 26.2 1.3 >sigma
1 44 VAL 5 61 52 18 34.6 2.0 >sigma
1 45 LYS 7 9 41 5 12.2 0.1 .
1 46 GLN 7 8 38 7 18.4 0.6 .
1 47 LYS 7 0 12 0 0.0 -1.0 >sigma
1 48 LYS 7 4 49 2 4.1 -0.6 .
1 49 ALA 3 14 26 3 11.5 0.0 .
1 50 SER 4 3 17 0 0.0 -1.0 >sigma
1 51 PHE 7 18 69 9 13.0 0.1 .
1 52 GLU 5 6 24 3 12.5 0.1 .
1 53 GLU 5 12 28 5 17.9 0.6 .
1 54 ALA 3 23 41 14 34.1 2.0 >sigma
1 55 SER 4 22 32 10 31.3 1.7 >sigma
1 56 ASN 6 10 22 7 31.8 1.8 >sigma
1 57 GLN 7 4 18 4 22.2 1.0 .
1 58 LEU 7 50 70 23 32.9 1.9 >sigma
1 59 ILE 6 29 63 15 23.8 1.1 >sigma
1 60 ASN 6 5 23 5 21.7 0.9 .
1 61 HIS 6 7 30 2 6.7 -0.4 .
1 62 ILE 6 38 66 20 30.3 1.7 >sigma
1 63 GLU 5 10 32 8 25.0 1.2 >sigma
1 64 GLN 7 5 15 3 20.0 0.8 .
1 65 PHE 7 23 68 16 23.5 1.1 >sigma
1 66 LEU 7 68 71 32 45.1 3.0 >sigma
1 67 ASP 4 7 17 2 11.8 0.0 .
1 68 THR 4 14 24 8 33.3 1.9 >sigma
1 69 ASN 6 6 9 1 11.1 -0.0 .
1 70 GLU 5 5 28 4 14.3 0.3 .
1 71 THR 4 21 27 7 25.9 1.3 >sigma
1 72 PRO 5 7 18 1 5.6 -0.5 .
1 73 TYR 6 25 51 17 33.3 1.9 >sigma
1 74 PHE 7 20 64 9 14.1 0.2 .
1 75 MET 6 13 32 7 21.9 0.9 .
1 76 LYS 7 27 60 15 25.0 1.2 >sigma
1 77 SER 4 22 37 8 21.6 0.9 .
1 78 ILE 6 38 75 18 24.0 1.1 >sigma
1 79 ASP 4 21 22 8 36.4 2.2 >sigma
1 80 CYS 4 14 35 11 31.4 1.8 >sigma
1 81 ILE 6 26 60 9 15.0 0.3 .
1 82 ARG 7 14 54 6 11.1 -0.0 .
1 83 ALA 3 12 29 8 27.6 1.4 >sigma
1 84 PHE 7 0 45 0 0.0 -1.0 >sigma
1 85 ARG 7 7 51 1 2.0 -0.8 .
1 86 GLU 5 0 14 0 0.0 -1.0 >sigma
1 87 GLU 5 4 41 2 4.9 -0.6 .
1 88 ALA 3 13 31 1 3.2 -0.7 .
1 89 ILE 6 0 21 0 0.0 -1.0 >sigma
1 90 LYS 7 11 19 1 5.3 -0.5 .
1 91 PHE 7 28 45 7 15.6 0.4 .
1 92 SER 4 3 7 0 0.0 -1.0 >sigma
1 93 GLU 5 8 33 3 9.1 -0.2 .
1 94 GLU 5 1 24 0 0.0 -1.0 >sigma
1 95 GLN 7 1 23 1 4.3 -0.6 .
1 96 ARG 7 8 57 4 7.0 -0.4 .
1 97 PHE 7 7 45 1 2.2 -0.8 .
1 98 ASN 6 4 29 2 6.9 -0.4 .
1 99 ASN 6 3 22 2 9.1 -0.2 .
1 100 PHE 7 13 49 6 12.2 0.1 .
1 101 LEU 7 16 58 8 13.8 0.2 .
1 102 LYS 7 5 33 3 9.1 -0.2 .
1 103 ALA 3 10 22 4 18.2 0.6 .
1 104 LEU 7 16 68 4 5.9 -0.5 .
1 105 GLN 7 8 46 5 10.9 -0.0 .
1 106 GLU 5 3 25 2 8.0 -0.3 .
1 107 LYS 7 7 58 3 5.2 -0.6 .
1 108 VAL 5 28 56 8 14.3 0.3 .
1 109 GLU 5 1 22 1 4.5 -0.6 .
1 110 ILE 6 2 25 2 8.0 -0.3 .
1 111 LYS 7 1 32 1 3.1 -0.7 .
1 112 GLN 7 7 21 0 0.0 -1.0 >sigma
1 113 LEU 7 45 56 16 28.6 1.5 >sigma
1 114 ASN 6 13 18 4 22.2 1.0 .
1 115 HIS 6 16 23 6 26.1 1.3 >sigma
1 116 PHE 7 23 68 9 13.2 0.2 .
1 117 TRP 10 15 49 9 18.4 0.6 .
1 118 GLU 5 13 27 8 29.6 1.6 >sigma
1 119 ILE 6 35 56 15 26.8 1.4 >sigma
1 120 VAL 5 29 62 13 21.0 0.8 .
1 121 VAL 5 26 47 10 21.3 0.9 .
1 122 GLN 7 9 19 5 26.3 1.3 >sigma
1 123 ASP 4 11 25 4 16.0 0.4 .
1 124 GLY 3 2 19 2 10.5 -0.1 .
1 125 ILE 6 7 69 3 4.3 -0.6 .
1 126 THR 4 16 40 11 27.5 1.4 >sigma
1 127 LEU 7 23 64 11 17.2 0.5 .
1 128 ILE 6 20 55 4 7.3 -0.4 .
1 129 THR 4 16 31 6 19.4 0.7 .
1 130 LYS 7 2 63 0 0.0 -1.0 >sigma
1 131 GLU 5 2 24 0 0.0 -1.0 >sigma
1 132 GLU 5 1 17 0 0.0 -1.0 >sigma
1 133 ALA 3 12 24 4 16.7 0.5 .
1 134 SER 4 3 18 1 5.6 -0.5 .
1 135 GLY 3 0 13 0 0.0 -1.0 >sigma
1 136 SER 4 5 26 1 3.8 -0.7 .
1 137 SER 4 1 7 0 0.0 -1.0 >sigma
1 138 VAL 5 4 32 0 0.0 -1.0 >sigma
1 139 THR 4 4 16 0 0.0 -1.0 >sigma
1 140 ALA 3 9 18 6 33.3 1.9 >sigma
1 141 GLU 5 5 28 3 10.7 -0.1 .
1 142 GLU 5 4 33 3 9.1 -0.2 .
1 143 ALA 3 10 42 6 14.3 0.3 .
1 144 LYS 7 4 27 3 11.1 -0.0 .
1 145 LYS 7 1 17 1 5.9 -0.5 .
1 146 PHE 7 17 40 10 25.0 1.2 >sigma
1 147 LEU 7 19 56 10 17.9 0.6 .
1 148 ALA 3 9 15 3 20.0 0.8 .
1 149 PRO 5 9 11 3 27.3 1.4 >sigma
1 150 LYS 7 0 16 0 0.0 -1.0 >sigma
1 151 ASP 4 0 8 0 0.0 -1.0 >sigma
1 152 LYS 7 0 4 0 0.0 -1.0 >sigma
stop_
save_