segName='   A'
seq="""
ARG LEU ARG ALA THR VAL SER ARG PRO VAL 
SER HIS GLN ARG MET GLY THR PRO MET VAL 
GLU ASN ASP SER GLY TYR LYS LEU GLY GLN 
ARG VAL ARG HIS ALA LYS PHE GLY GLU GLY 
THR ILE VAL ASN MET GLU GLY SER GLY GLU 
HIS SER ARG LEU GLN VAL ALA PHE GLN GLY 
GLN GLY ILE LYS TRP LEU VAL ALA ALA TYR 
ALA ARG LEU GLU SER VAL
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
