segName='   A'
seq="""
ARG ASN LEU ALA GLU LEU HIS ILE GLY GLN 
PRO VAL VAL HIS LEU GLU HIS GLY VAL GLY 
ARG TYR ALA GLY MET THR THR LEU GLU ALA 
GLY GLY ILE THR GLY GLU TYR LEU MET LEU 
THR TYR ALA ASN ASP ALA LYS LEU TYR VAL 
PRO VAL SER SER LEU HIS LEU ILE SER ARG 
TYR ALA GLY GLY ALA GLU GLU ASN ALA PRO 
LEU HIS LYS LEU GLY GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
