segName='   A'
seq="""
VAL ALA LYS LYS ASN GLN LYS GLN ALA GLN 
VAL LYS GLU ILE LYS PHE ARG PRO GLY THR 
GLU GLU GLY ASP TYR GLN VAL LYS LEU ARG 
ASN LEU VAL ARG PHE LEU SER GLU GLY ASP 
LYS ALA LYS VAL SER LEU ARG PHE ARG GLY 
ARG GLU MET ALA HIS GLN GLU LEU GLY MET 
GLU LEU LEU LYS ARG VAL GLU ALA ASP LEU 
VAL GLU TYR GLY THR VAL GLU GLN HIS PRO 
LYS LEU GLU GLY ARG GLN LEU MET MET VAL 
ILE ALA PRO LYS LYS LYS LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
