segName='   A'
seq="""
GLY ASP ILE LYS CYS SER GLY THR ARG GLN 
CYS TRP GLY PRO CYS LYS LYS GLN THR THR 
CYS THR ASN SER LYS CYS MET ASN GLY LYS 
CYS LYS CYS TYR GLY CYS VAL
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
