segName='   A'
seq="""
GLY PRO LEU GLY SER VAL GLN HIS VAL GLY 
PHE LYS CYS ASP ASN CYS GLY ILE GLU PRO 
ILE GLN GLY VAL ARG TRP HIS CYS GLN ASP 
CYS PRO PRO GLU MET SER LEU ASP PHE CYS 
ASP SER CYS SER ASP CYS LEU HIS GLU THR 
ASP ILE HIS LYS GLU ASP HIS GLN LEU GLU 
PRO ILE TYR ARG
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
