segName='   C'
seq="""
GLY HIS MET ASP PRO VAL LEU ARG GLU MET 
GLU GLN LYS LEU GLN GLN GLU GLU GLU ASP 
ARG GLN LEU ALA LEU GLN LEU GLN ARG MET 
PHE ASP ASN GLU ARG ARG THR VAL SER ARG 
ARG LYS GLY SER VAL ASP GLN TYR LEU LEU 
ARG SER SER ASN MET ALA GLY ALA LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
