segName='   A'
seq="""
ILE PRO SER SER PRO VAL HIS LEU LYS ARG 
LEU LYS LEU LEU LEU LEU LEU LEU LEU LEU 
ILE LEU LEU LEU ILE LEU GLY ALA LEU LEU 
LEU GLY LEU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
