segName='   A'
seq="""
GLY SER MET GLU GLN GLY PHE LEU PRO LYS 
GLY TRP GLU VAL ARG HIS ALA PRO ASN GLY 
ARG PRO PHE PHE ILE ASP HIS ASN THR LYS 
THR THR THR TRP GLU ASP PRO ARG LEU LYS 
ILE PRO ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
