segName='   A'
seq="""
GLY ALA MET GLY SER VAL ASP SER ALA ASP 
ALA GLY GLY GLY SER GLY TRP LEU THR GLY 
TRP LEU PRO THR TRP CYS PRO THR SER THR 
SER HIS LEU LYS GLU ALA GLU GLU LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
