segName='   A'
seq="""
MET SER SER LYS GLU THR ILE PRO MET HIS 
GLN ARG SER GLN ASN VAL ALA GLU LEU LEU 
THR VAL LEU MET ASP ILE ASN LYS ILE ASN 
GLY GLY ASP SER THR THR ALA GLU LYS MET 
LYS VAL HIS ALA LYS SER PHE GLU ALA ALA 
LEU PHE GLU LYS SER SER SER LYS GLU GLU 
TYR GLN LYS THR MET LYS SER LYS ILE ASP 
ALA MET ARG SER THR ARG ASP LYS ARG LYS 
ARG GLU SER VAL GLY SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
