segName='   A'
seq="""
MET ASP LYS ILE ASN PRO ASP TRP ALA LYS 
ASP ILE PRO CYS ARG ASN ILE THR ILE TYR 
GLY TYR CYS LYS LYS GLU LYS GLU GLY CYS 
PRO PHE LYS HIS SER ASP ASN THR THR ALA 
THR
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
