segName='   A'
seq="""
GLY SER SER GLY SER SER GLY LYS ILE PHE 
THR CYS GLU TYR CYS ASN LYS VAL PHE LYS 
PHE LYS HIS SER LEU GLN ALA HIS LEU ARG 
ILE HIS THR ASN GLU LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
