segName='   A'
seq="""
GLY PRO LEU GLY SER ASP HIS ILE TRP GLU 
GLN HIS THR VAL THR LEU HIS ARG ALA PRO 
GLY PHE GLY PHE GLY ILE ALA ILE SER GLY 
GLY ARG ASP ASN PRO HIS PHE GLN SER GLY 
GLU THR SER ILE VAL ILE SER ASP VAL LEU 
LYS GLY GLY PRO ALA GLU GLY GLN LEU GLN 
GLU ASN ASP ARG VAL ALA MET VAL ASN GLY 
VAL SER MET ASP ASN VAL GLU HIS ALA PHE 
ALA VAL GLN GLN LEU ARG LYS SER GLY LYS 
ASN ALA LYS ILE THR ILE ARG ARG LYS LYS 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
