segName='   A'
seq="""
MET ASP GLU THR GLY LYS GLU LEU VAL LEU 
ALA LEU TYR ASP TYR GLN GLU LYS SER PRO 
ARG GLU VAL THR MET LYS LYS GLY ASP ILE 
LEU THR LEU LEU ASN SER THR ASN LYS ASP 
TRP TRP LYS VAL GLU VAL LYS ILE THR VAL 
ASN GLY LYS THR TYR GLU ARG GLN GLY PHE 
VAL PRO ALA ALA TYR VAL LYS LYS LEU ASP 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
