segName='   A'
seq="""
G A G C C C U G G G 
A G G C U C
"""
patch_list=[]
seqType='rna'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
