segName='   A'
seq="""
MET ALA GLY SER GLY ILE ILE TYR LYS GLN 
PRO ILE TYR GLN GLY ASN LEU ILE LYS GLN 
ASN ALA VAL GLU GLN LEU GLN VAL GLY GLN 
SER LYS GLN GLN VAL SER ALA LEU LEU GLY 
THR PRO SER ILE PRO ASP PRO PHE HIS ALA 
GLN ARG TRP ASP TYR THR SER THR GLN ARG 
VAL ASP ARG LEU ALA ARG THR GLU ILE LYS 
ASN PHE THR VAL PHE PHE GLU ASN GLU GLN 
VAL VAL ARG TRP GLU GLY ASP TYR PHE PRO 
SER GLN ASP GLU GLN LEU ALA LYS ALA ALA 
PRO LYS GLN PHE GLY ARG ASN LEU ALA ARG 
ASP LYS LYS LYS GLN ARG GLY ARG
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
