segName='   A'
seq="""
GLY LYS ARG SER TRP ASP THR GLU SER VAL 
LEU ALA MET TRP VAL LEU ALA LEU ILE VAL 
ILE PHE LEU THR ILE ALA VAL LEU LEU ALA 
LEU ARG PHE CYS GLY ILE TYR GLY TYR ARG 
LEU ARG ARG LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
