segName='   A'
seq="""
ALA ASP ASP ILE VAL PHE LYS ALA LYS ASN 
GLY ASP VAL LYS PHE PRO HIS LYS ALA HIS 
GLN LYS ALA VAL PRO ASP CYS LYS LYS CYS 
HIS GLU LYS GLY PRO GLY LYS ILE GLU GLY 
PHE GLY LYS GLU MET ALA HIS GLY LYS GLY 
CYS LYS GLY CYS HIS GLU GLU MET LYS LYS 
GLY PRO THR LYS CYS GLY GLU CYS HIS LYS 
LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
