segName='   A'
seq="""
MET ALA GLY PHE LEU LYS VAL VAL GLN LEU 
LEU ALA LYS TYR GLY SER LYS ALA VAL GLN 
TRP ALA TRP ALA ASN LYS GLY LYS ILE LEU 
ASP TRP LEU ASN ALA GLY GLN ALA ILE ASP 
TRP VAL VAL SER LYS ILE LYS GLN ILE LEU 
GLY ILE LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
