segName='   A'
seq="""
MET SER LYS GLU ASP SER PHE GLU MET GLU 
GLY THR VAL VAL ASP THR LEU PRO ASN THR 
MET PHE ARG VAL GLU LEU GLU ASN GLY HIS 
VAL VAL THR ALA HIS ILE SER GLY LYS MET 
ARG LYS ASN TYR ILE ARG ILE LEU THR GLY 
ASP LYS VAL ARG VAL GLU LEU THR PRO TYR 
ASP LEU SER LYS GLY ARG ILE THR TYR ARG 
ALA ARG
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
