segName='   A'
seq="""
GLY ALA THR ALA VAL SER GLU TRP THR GLU 
TYR LYS THR ALA ASP GLY LYS THR TYR TYR 
TYR ASN ASN ARG THR LEU GLU SER ASP TRP 
GLU LYS PRO GLN GLU LEU LYS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
