segName='   A'
seq="""
LYS TYR TYR GLY ASN GLY VAL SER CYS ASN 
LYS LYS GLY CYS SER VAL ASP TRP GLY LYS 
ALA ILE GLY ILE ILE GLY ASN ASN ALA ALA 
ALA ASN LEU THR THR GLY GLY LYS ALA GLY 
TRP LYS GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
