segName='   A'
seq="""
G C A G C A G G G A 
A C U C A C G C U U 
G C G U A G A G G C 
U A A G U G C U U C 
G G C A C A G C A C 
A A G C C C G C U G 
C G
"""
patch_list=[]
seqType='rna'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
