segName='   A'
seq="""
GLY THR ILE ASP GLU TRP LEU LEU LYS GLU 
ALA LYS GLU LYS ALA ILE GLU GLU LEU LYS 
LYS ALA GLY ILE THR SER ASP TYR TYR PHE 
ASP LEU ILE ASN LYS ALA LYS THR VAL GLU 
GLY VAL ASN ALA LEU LYS ASP GLU ILE LEU 
LYS ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
