segName='   A'
seq="""
GLY SER TYR GLY GLN SER CYS CYS LEU ILE 
GLU ASP GLY GLU ARG CYS VAL ARG PRO ALA 
GLY ASN ALA SER PHE SER LYS ARG VAL GLN 
LYS SER ILE SER GLN LYS LYS LEU LYS LEU 
ASP ILE ASP LYS SER VAL ARG HIS LEU TYR 
ILE CYS ASP PHE HIS LYS ASN PHE ILE GLN 
SER VAL ARG ASN LYS ARG LYS ARG LYS THR 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
