segName='   D'
seq="""
GLY THR LYS LYS TYR ASP LEU SER LYS TRP 
LYS TYR ALA GLU LEU ARG ASP THR ILE ASN 
THR SER CYS ASP ILE GLU LEU LEU ALA ALA 
CYS ARG GLU GLU PHE HIS ARG ARG LEU LYS 
VAL TYR HIS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
