segName='   A'
seq="""
ALA ASP ASN LYS CYS GLU ASN SER LEU ARG 
ARG GLU ILE ALA CYS GLY GLN CYS ARG ASP 
LYS VAL LYS THR ASP GLY TYR PHE TYR GLU 
CYS CYS THR SER ASP SER THR PHE LYS LYS 
CYS GLN ASP LEU LEU HIS
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
