segName='   A'
seq="""
PRO THR ARG THR VAL ALA ILE SER ASP ALA 
ALA GLN LEU PRO HIS ASP TYR CYS THR . 
PRO GLY GLY THR LEU PHE SER THR . PRO 
GLY GLY THR ARG ILE ILE TYR ASP ARG LYS 
PHE LEU LEU ASP ARG
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
