segName='   A'
seq="""
GLY PRO ALA SER VAL PRO THR THR CYS CYS 
PHE ASN LEU ALA ASN ARG LYS ILE PRO LEU 
GLN ARG LEU GLU SER TYR ARG ARG ILE THR 
SER GLY LYS CYS PRO GLN LYS ALA VAL ILE 
PHE LYS THR LYS LEU ALA LYS ASP ILE CYS 
ALA ASP PRO LYS LYS LYS TRP VAL GLN ASP 
SER MET LYS TYR LEU ASP GLN LYS SER PRO 
THR PRO LYS PRO
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
