segName='   C'
seq="""
THR VAL GLY ASP GLU ILE VAL ASP LEU THR 
CYS GLU SER LEU GLU PRO VAL VAL VAL ASP 
LEU THR HIS ASN ASP
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
