segName='   A'
seq="""
ALA PHE ASP SER THR TRP LYS VAL ASP ARG 
SER GLU ASN TYR ASP LYS PHE MET GLU LYS 
MET GLY VAL ASN ILE VAL LYS ARG LYS LEU 
ALA ALA HIS ASP ASN LEU LYS LEU THR ILE 
THR GLN GLU GLY ASN LYS PHE THR VAL LYS 
GLU SER SER ALA PHE ARG ASN ILE GLU VAL 
VAL PHE GLU LEU GLY VAL THR PHE ASN TYR 
ASN LEU ALA ASP GLY THR GLU LEU ARG GLY 
THR TRP SER LEU GLU GLY ASN LYS LEU ILE 
GLY LYS PHE LYS ARG THR ASP ASN GLY ASN 
GLU LEU ASN THR VAL ARG GLU ILE ILE GLY 
ASP GLU LEU VAL GLN THR TYR VAL TYR GLU 
GLY VAL GLU ALA LYS ARG ILE PHE LYS LYS 
ASP
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
