segName='   A'
seq="""
SER MET ALA ASP ARG VAL LEU ARG GLY SER 
ARG LEU GLY ALA VAL SER TYR GLU THR ASP 
ARG ASN HIS ASP LEU ALA PRO ARG GLN ILE 
ALA ARG TYR ARG THR ASP ASN GLY GLU GLU 
PHE GLU VAL PRO PHE ALA ASP ASP ALA GLU 
ILE PRO GLY THR TRP LEU CYS ARG ASN GLY 
MET GLU GLY THR LEU ILE GLU GLY ASP LEU 
PRO GLU PRO LYS LYS VAL LYS PRO PRO ARG 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
