segName='   A'
seq="""
GLY SER HIS MET LYS THR LYS LYS GLN GLN 
TYR VAL THR ILE LYS GLY THR LYS ASN GLY 
LEU THR LEU HIS LEU ASP ASP ALA CYS SER 
PHE ASP GLU LEU LEU ASP GLY LEU GLN ASN 
MET LEU SER ILE GLU GLN TYR THR ASP GLY 
LYS GLY GLN LYS ILE SER VAL HIS VAL LYS 
LEU GLY ASN ARG PHE LEU TYR LYS GLU GLN 
GLU GLU GLN LEU THR GLU LEU ILE ALA SER 
LYS LYS ASP LEU PHE VAL HIS SER ILE ASP 
SER GLU VAL ILE THR LYS LYS GLU ALA GLN 
GLN ILE ARG GLU GLU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
