segName='   A'
seq="""
GLY PRO LEU GLY SER VAL ALA LYS LYS ILE 
THR TRP ARG LYS GLN ASP LEU ASP ARG LEU 
LYS ARG VAL ILE ALA LEU LYS LYS PRO SER 
ALA SER ASP ALA ASP TRP THR GLU VAL LEU 
ARG LEU LEU ALA LYS GLU GLY VAL VAL GLU 
PRO GLU VAL VAL ARG GLN ILE ALA ILE THR 
ARG LEU LYS TRP VAL GLU PRO
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
