segName='   A'
seq="""
DA DA DG DG DG DT DG DG DG DT 
DG DT DA DA DG DT DG DT DG DG 
DG DT DG DG DG DT
"""
patch_list=[]
seqType='dna'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
