segName='   A'
seq="""
GLY ILE VAL GLU GLN CYS CYS THR SER ILE 
CYS SER LEU TYR GLN LEU GLU ASN TYR CYS 
ASN GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
