segName='   A'
seq="""
ALA ALA CYS SER ASP ARG ALA HIS GLY HIS 
ILE CYS GLU SER PHE LYS SER PHE CYS LYS 
ASP SER GLY ARG ASN GLY VAL LYS LEU ARG 
ALA ASN CYS LYS LYS THR CYS GLY LEU CYS 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
