segName='   A'
seq="""
GLY GLY THR GLY ASN LYS VAL THR ILE TYR 
TYR LYS LYS GLY PHE ASN SER PRO TYR ILE 
HIS TYR ARG PRO ALA GLY GLY SER TRP THR 
ALA ALA PRO GLY VAL LYS MET GLN ASP ALA 
GLU ILE SER GLY TYR ALA LYS ILE THR VAL 
ASP ILE GLY SER ALA SER GLN LEU GLU ALA 
ALA PHE ASN ASP GLY ASN ASN ASN TRP ASP 
SER ASN ASN THR LYS ASN TYR SER PHE SER 
THR GLY THR SER THR TYR THR PRO GLY ASN 
SER GLY ASN ALA GLY THR ILE THR SER GLY 
ALA PRO ALA GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
