segName='   A'
seq="""
MET GLY ALA GLY GLN THR PRO HIS PRO GLN 
LEU ILE TRP PRO ALA LEU LEU LYS GLN GLN 
GLY CYS ASN GLU LEU LEU PRO LEU ARG THR 
ASN ASP ASP TRP GLN ARG PHE CYS ALA ASP 
SER LYS HIS LEU LEU GLN TYR GLY ASP LYS 
LEU VAL ASP SER ASN PHE HIS CYS PHE VAL 
LEU GLU GLU ASP ALA HIS TRP HIS PRO ALA 
ALA PRO LEU PRO PRO GLU GLY LEU ASN ASP 
LEU ILE ARG ALA HIS CYS ALA THR LEU GLY 
HIS CYS CYS THR SER LYS MET HIS LEU HIS 
SER VAL MET ASP ALA ILE ASP PHE LEU ASN 
ALA LEU GLU GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
