segName='   A'
seq="""
GLY GLU GLN VAL PHE ALA VAL GLU SER ILE 
ARG LYS LYS ARG VAL ARG LYS GLY LYS VAL 
GLU TYR LEU VAL LYS TRP LYS GLY TRP PRO 
PRO LYS TYR SER THR TRP GLU PRO GLU GLU 
HIS ILE LEU ASP PRO ARG LEU VAL MET ALA 
TYR GLU GLU LYS GLU GLU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
