segName='   A'
seq="""
GLY SER HIS MET LYS LYS GLN LYS VAL LYS 
THR ILE PHE PRO HIS THR ALA GLY SER ASN 
LYS THR LEU LEU SER PHE ALA GLN GLY ASP 
VAL ILE THR LEU LEU ILE PRO GLU GLU LYS 
ASP GLY TRP LEU TYR GLY GLU HIS ASP VAL 
SER LYS ALA ARG GLY TRP PHE PRO SER SER 
TYR THR LYS LEU LEU GLU GLU
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
