segName='   A'
seq="""
GLY SER PRO GLU PHE ASP SER ALA GLU GLU 
LYS LEU PRO PHE PRO PRO ASP ILE ASP PRO 
GLN VAL PHE TYR GLU LEU PRO GLU GLU VAL 
GLN LYS GLU LEU MET ALA GLU TRP GLU ARG 
ALA GLY ALA ALA ARG PRO SER ALA HIS ARG 
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
