segName='   A'
seq="""
VAL PRO VAL GLY SER ASP CYS GLU PRO LYS 
LEU CYS THR MET ASP LEU VAL PRO HIS CYS 
PHE LEU ASN PRO GLU LYS GLY ILE VAL VAL 
VAL HIS GLY GLY CYS ALA LEU SER LYS TYR 
LYS CYS GLN ASN PRO ASN HIS GLU LYS LEU 
GLY TYR THR HIS GLU CYS GLU GLU ALA ILE 
LYS ASN ALA PRO ARG PRO
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
