segName='   A'
seq="""
VAL ASP MET SER ASN VAL VAL LYS THR TYR 
ASP LEU GLN ASP GLY SER LYS VAL HIS VAL 
PHE LYS ASP GLY LYS MET GLY MET GLU ASN 
LYS PHE GLY LYS SER MET ASN MET PRO GLU 
GLY LYS VAL MET GLU THR ARG ASP GLY THR 
LYS ILE ILE MET LYS GLY ASN GLU ILE PHE 
ARG LEU ASP GLU ALA LEU ARG LYS GLY HIS 
SER GLU GLY GLY
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
