segName='   A'
seq="""
TYR VAL GLU PHE SER GLU GLU CYS MET HIS 
GLY SER GLY GLU ASN TYR ASP GLY LYS ILE 
SER LYS THR MET SER GLY LEU GLU CYS GLN 
ALA TRP ASP SER GLN SER PRO HIS ALA HIS 
GLY TYR ILE PRO SER LYS PHE PRO ASN LYS 
ASN LEU LYS LYS ASN TYR CYS ARG ASN PRO 
ASP ARG ASP LEU ARG PRO TRP CYS PHE THR 
THR ASP PRO ASN LYS ARG TRP GLU TYR CYS 
ASP ILE PRO ARG CYS ALA ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
