segName='   A'
seq="""
GLY SER HIS MET SER THR ASN PRO PHE ASP 
ASP ASP ASN GLY ALA PHE PHE VAL LEU VAL 
ASN ASP GLU ASP GLN HIS SER LEU TRP PRO 
VAL PHE ALA ASP ILE PRO ALA GLY TRP ARG 
VAL VAL HIS GLY GLU ALA SER ARG ALA ALA 
CYS LEU ASP TYR VAL GLU LYS ASN TRP THR 
ASP LEU ARG PRO LYS SER LEU ARG ASP ALA 
MET VAL GLU ASP
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
