segName='   A'
seq="""
SER ASP ALA ALA ALA ARG VAL THR ALA ILE 
LEU SER SER LEU THR VAL THR GLN LEU LEU 
ARG ARG LEU HIS GLN TRP ILE SER
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
