segName='   A'
seq="""
PCA ASP TRP LEU THR PHE GLN LYS LYS HIS 
ILE THR ASN THR ARG ASP VAL ASP CYS ASP 
ASN ILE MET SER THR ASN LEU PHE HIS CYS 
LYS ASP LYS ASN THR PHE ILE TYR SER ARG 
PRO GLU PRO VAL LYS ALA ILE CYS LYS GLY 
ILE ILE ALA SER LYS ASN VAL LEU THR THR 
SER GLU PHE TYR LEU SER ASP CYS ASN VAL 
THR SER ARG PRO CYS LYS TYR LYS LEU LYS 
LYS SER THR ASN LYS PHE ALA VAL THR CYS 
GLU ASN GLN ALA PRO VAL HIS PHE VAL GLY 
VAL GLY SER ALA
"""
patch_list=[]
seqType='prot'
seqSplit = seq.split()
#print "finished reading ["+`len(seqSplit)`+"] residue(s) for a ["+seqType+"] type segi: ["+segName+"]"
